Biostar Beta. Not for public use.
Transcript consensus sequence for variant calling analysis
Entering edit mode
14 months ago
bharata1803 • 420


I want to ask a bit general question about variant calling workflow. In bcftools, we can generate consensus sequence for te variation we find. I have tried it with human genome reference and it can generate consensus file in fasta format. My question is, is it possible to generate consensus sequence from transcript reference (cDNA human reference)? What I imagine is we can get fasta file for transcript sequence with variation in it. Thank you.


Login before adding your answer.

Similar Posts
Loading Similar Posts
Powered by the version 2.1