Retrieving species information from ensembl bacteria in JSON doesn't work
When I try to retrieve the information with
$wget -O bacterias.txt http://rest.ensemblgenomes.org/info/species?content-type=application/json;compara=bacteria
my download doesn't surpasses the 87%
--2017-01-17 13:27:17-- http://rest.ensemblgenomes.org/info/species?content-type=application/json
Resolviendo rest.ensemblgenomes.org rest.ensemblgenomes.org)... 193.62.192.83
Conectando con rest.ensemblgenomes.org rest.ensemblgenomes.org)[193.62.192.83]:80... conectado.
Petición HTTP enviada, esperando respuesta... 200 OK
Longitud: 14291898 (14M) [application/json]
Grabando a: “bacterias.txt”
bacterias.txt 86%[=============================================> ] 11,75M --.-KB/s en 2m 15s
2017-01-17 13:29:41 (89,3 KB/s) - Conexión cerrada en el byte 12320768. Reintentando.
My OS is in Spanish, but I guess you can understand: the download never ends, the connections closes and then wget retries the operation indefinitely.
When I try using xml
wget -O bacterias.txt http://rest.ensemblgenomes.org/info/species?content-type=text/xml;compara=bacteria
everything works fine. Do you know any workaround to get this information in JSON format?
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Problem must be on your end (check on Firewall restrictions etc). JSON download worked.
JSON works for me:
Ok, I'm deleting then. I tried two networks in two different computers. Probably just bad luck.