Bismark html processing report error
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7.3 years ago
potroy2007 • 0

According to the manual, the script bismark2report uses a Bismark alignment report to generate a graphical HTML report page.

However, when I try to run it, the error "No such file or directory at /software/bismark/0.16.3/bin/bismark2report line 948" was returned. I checked line 948 in the script and it is "open (DOC,"$Bin/bismark_sitrep.tpl") or die $!;". Do anyone know what this means and how can this be fixed? I'm using bismark/0.16.3 on an institutional high computing cluster btw.

This is my first post on the forum so sorry if my question wasn't worded or fomatted optimally :).

bismark software error bisulfite-sequencing • 1.8k views
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Does the following file exist:

/software/bismark/0.16.3/bin/bismark_sitrep.tpl
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