This is a test version of Biostars. For the public version, visit https://www.biostars.org.
MCF-7 Cell Line DNA Sequence Data

Hi, We are planning to analyze some cancer cell lines for variants such as mutations, gene fusions and structural variants. I am looking for sequencing data for MCF-7 cell line. I have been able to find RNA-seq sequencing data from CCLE but cannot find DNA sequencing data. Does anyone know if MCF-7 DNA sequencing data exists and is available for download. Thanks, - Pankaj

cancer cell line mcf-7 dna sequence wgs wxs

2 answers

CCLE has MCF7 DNA sequencing. You need to login though.

MCF-7 is an ENCODE cell line. You should find plenty of different types of NGS data there.

Log in to answer this question.