De Novo assembly?
I want to ask about the meaning of paired-end data and mate- pair data in De Novo assembly of paired data? and what is the meaning of assembly of paired data itself?
• 1,939 views
•
link
updated
by
igor
•
written
by
walaa.shaalan •
•
written
by
walaa.shaalan •
1 answer
See this previous discussion: Difference Between "Mate Pair" And "Pair-End"
Log in to answer this question.
More posts like this
-
BAM FLAG mate unmappedand mate reverse strand
written by esimonova.me •
-
Difference between mate-pair, paired-end and long read
written by Chvatil
-
Best practice for de novo assembly
written by codsorre •
-
Kmergenie query: can paired-end and mate-pair reads be used together for input?
written by soniabedi.07 •
-
aligning Illumina mate-pair/ log mate pair libraries using BBMAP
written by bio_d •
-
K-mer size and de-novo assembly and SNP mining
written by ram.mainali •
-
Blog: What mate pair sequencing is for
written by Adele Feuerstein
-
Determining Paired-end or Mate-pair insert length in De Novo Sequencing
written by sameedmsiddiqui •
-
VELVET de novo plant genome, strategy question
written by dsoronellas •
-
Denovo Assembly Of Paired And Mate Paired Reads
written by sebabiokr •
Hi walaa.shaalan.
Please have a look at page 5 of this Datasheet for visual comparison. Or here for Mate-end and here for Paired-end sequencing.
Also it would be fun to see this animation.
~ Best