python: translate DNA sequences to protien sequences
1 answer
Maybe in the Biopython tutorial you can find an answer in Chapter 3.9 Translation: http://biopython.org/DIST/docs/tutorial/Tutorial.html#htoc25
• 0 views
•
link
written
by
luzswrld •
Log in to answer this question.
More posts like this
-
How to filter "productive" amino acid sequences
written by sil_bioinfo •
-
Generating a consensus sequence of a large number of amino acid sequences in python
written by unicorn2kang •
-
Python sequence logo from manually calculated bits and proportions?
written by Noel •
-
Software or R package that can handle ambiguous sanger sequencing nucleotides
written by Marwah •
-
Python script error
written by Abdul Rafay Khan
-
convert DNA FASTA to protein FASTA format (faa)
written by nkuo •
-
Is there a way to translate amino acid sequences into atomic sequences?
written by Naresh
-
Finding arbitrary sequences in Seq objects from Biopython
written by knpayne2 •
-
how to extract blastxed sequences' corresponding amino acid sequences
written by Kurban
-
How To Change The Alphabet Of Seqrecords In A Fasta File With Biopython?
written by Laura •
They are plenty of examples online:
Python Script To Translate Rna Sequences To Protein Sequences
They could be used with a little bit of work on the format of the input.
Whatever script you choose, be sure you use the correct codon table
https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi
Did you try to write something?