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Masurca disk space issue

Hi

I am running Masurca on a 380MBp genome. I have 861G of disk space and masurca fails writes 818G to this disk. I read you can free some space and re-run the assembler so that it continues from where it left off. My question is, which files are safe to delete from the various output files.

Thank you

assembly
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updated by caizexi123 • caizexi123 • written by mafireyi • mafireyi

1 answer

Hi, I have the same issued, so I asked the team, this is the reply. At that time, the pipeline stopped at very last step. " big files you can delete (following my directions) quorum_mer_db.jf, work1/superReadSequences.all.fasta work1/readPositionsInSuperreads

--Aleksey " By the way, you best asked the author, they reply very quick. You should tell them where the pipeline stop.

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written by caizexi123 • caizexi123

Thanks a lot. Let me delete those and see what happens

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written by mafireyi • mafireyi

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