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Mauve LCBs total length

Hi everyone,

Using Mauve for the comparison of two draft genomes, I would like to get the total bp length of all LCBs (Locally collinear blocks) for each genome. Would anyone know a way to get that information?

Thanks in advance

mauve software genome alignment
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written by guillaume.rbt guillaume.rbt

Or more generally, if there is way to know the percentage of homologous sequence between two genomes.

• 1 views • link
written by guillaume.rbt guillaume.rbt

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