Matching Uniprot position to Pfam HMM position
I have a single sequence position representing an amino acid substitution in a protein for which I have the Uniprot accession and the sequence.
I also retreived the positions (start and end) and identifiers for all Pfam domains present in the protein.
Now I have a dataset that annotates the Pfam HMM profile for each Pfam family with data that I need. Is it possible, given a residue position in a domain within a protein with a Uniprot entry, to find out which position in the Pfam HMM that corresponds to?
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