the question about new TCGA Rnaseq data
I find people often use rsem normalized result of TCGA Rnaseq data in DCC server, but i can't find this data in the TCGA new server any more. Now, they only provide HTSeq-FPKM, HTSeq-FPKM-UQ and HTSeq-Counts data. Is that mean one of these three kind can instead rsem data? If not, how can i get rsem value from this three kind data? Thank you
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pxf109 •
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pxf109 •
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FireHose is a good place to get rsem normalized result of TCGA data.
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JackieMe •
the legacy archive at GDC (https://gdc-portal.nci.nih.gov/) might also have the data your are looking for
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