How to retrieve RNA sequences
I have cuff-merge results, its provide me coordinates of genome. I retrieve the genomics sequences of these transcripts. I have a confusion. This is Gene (DNA)sequences of this transcripts, how i can get the RNA sequences data.?
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Devon Ryan
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sdf.ambreen •
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sdf.ambreen •
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You can use gtf_to_fasta from tophat. It'll give you the spliced transcripts.
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