This is a test version of Biostars. For the public version, visit https://www.biostars.org.
SignalP-HMM 3.0 results

I have doubts about the SignalP-HMM result. For example:

name ! Cmax pos ? Sprob ?

KXJ84657.1 S 0.484 35 N 0.737 Y
KXJ84660.1 S 0.651 37 Y 0.952 Y

For a protein to be considered to have the signal peptide, does it need to have ! = S, Cmax pos ? = Y and Sprob ?= Y or the KXJ84657.1 might be considered have the signal peptide to?

sequence
• 4,605 views • link
updated by Asaf Asaf • written by casley_queiroz • casley_queiroz

1 answer

It might have a signal peptide which isn't cleaved. You might want to run it in their server and look at the diagram to be more decisive.

• 1 views • link
written by Asaf Asaf

Log in to answer this question.

More posts like this