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bl2seq paramters question

Hello everyone,

I have BLAST question, hope you can help me with. I'm using bl2seq on unix, with the following parameters: -F F -r 1 -q -1 -E 1 -G 4 -W 7 Is it possible to define a hit length? For example, I would like to receive hits at least 50 bp long (not necessarily all of those bp should be identical).

Thanks in advance, Ilana

blast bl2seq

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