pattern finding between sequences
How to find pattern between these sequences? That generated by regx -
GGGGGTGGAGG,GGCGGGGTGGGGG,GGCGGGGGGGG how to find GQSes between these sequences?
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GenoMax
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srivvivek20 •
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srivvivek20 •
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Please word your question better and give us more context. Please read item #3 on A: How do I ask a question on Biostars?
You can use fuzznuc from EMBOSS.
See also this site, it may be helpful.
http://www.bioinformatics.org/sms2/dna_pattern.html
But you have to ask for a particular pattern.
What does GQS stand for? It's a new term for me :)
G-quadruplex forming sequences (GQS).