Boxplot of phenotype~SNP1:SNP2
Can I generate a boxplot like the one attached in image ?
I just know simple one.
boxplot(phenotype~SNP1:SNP2)

snp
boxplot
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kumar.vinod81
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You can more or less do that with ggplot2 in R. It won't automatically put the nice G/G, G/T and such labels up top, but that's quick and easy afterward in Illustrator.