How To Check Whole Genome With Bigwigsummary ?
Hi,
I have question about bigwigsummary tools ,
I have my start and end positions and my bigwig file but I want to check whole genome instead of chromosome by chromosome Is there any option to use this tool in that way ?
I know that for each chromosome I have to use :
bigWigSummary -type=X bigwigfile chrN start end datapoints
I want to check from chr1 to chrX.
Thanks in Advance.
• 3,423 views
•
link
1 answer
I am not sure it is possible to scan the whole genome in one go. Why not just use a bash script to run the script once for each chromosome.
• 0 views
•
link
Log in to answer this question.