Hello,
Is there any MAF multiple alignment file viewer? I have aligned 100 large genomes for synteny, I got the MAF output. Please can you suggest the best way to process this large file to get to very specific genomic regions I want to compare.
Regards,
A
Thanks Natasha. The format is MAF. There is a software call MAFfilter who can handle these type of files but I was wondering whether there was something else out there.