BED tool output
Hello all
I am new to this group and I am primarily a clinician.I have got a BED tool output as a part of a project. I am trying to understand this. Will be grateful for your help.
Number of bases with coverage more than 0: 99.03%
Mean depth of coverage for bases with coverage more than 0: 168.29X
My understanding of the above is that there has been 99.03% coverage of the reference genome and each base has been on an average sequenced 168.29X?
Am I right in understanding this way?
Many Thanks
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Regions defined in the BED file (not the reference genome) are ~99% covered (must be a targeted sequencing type dataset). The mean depth of coverage is 168x.