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Execute Plink Cmd From Within R Script?

anyone have R code to execute plink cmd from within R script? i know plink developers have written R-plugins, but these are not implemented in Windows 7 (OS i am using).

r plink
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updated by gopalgowane • gopalgowane • written by Occam Occam

2 answers

system("plink --flag1 --flag2 --etc")

That's how I do it, anyway.

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written by David Quigley David Quigley

so simple. just saved me hours. thx!

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written by Occam Occam

try using system("./plink --file --flag1 --flag2 --out")

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written by gopalgowane • gopalgowane

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