This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Download Target Sequencing Data And Whole Genome Of Same Individuals

Dear all,

This may be a simple (or stupid) question for you all, but I did not get any solution. I want to download target sequencing data (whole exome or some genes) and whole genome of same individuals. This thing can happen in 2 cases- when somebody did exome sequencing (captured) of individuals (may be normal or disease individuals) and then realized that whole genome sequencing is better for these individuals. Secondly, after whole genome sequencing somebody did target sequencing to measure the performance of capture technologies. So far I found this paper, but they worked on single individual and I am looking for group of individuals (like for 10 or 15 individuals). Any suggestions?

Thanks and Best regards,
Vikas

next-gen-sequencing
• 2,943 views • link
updated by Ram Ram • written by Vikas Bansal Vikas Bansal

1 answer

perhaps 1000 genomes data? I remember they sequenced both whole-genome and whole-exome for some individuals, not sure if you can get the data separately though.

• 0 views • link
written by Wen.Huang Wen.Huang

Finally, I understood little bit about how data is stored at ftp of 1000 genome project.

• 0 views • link
written by Vikas Bansal Vikas Bansal

Log in to answer this question.

More posts like this