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RNA-Seq Genome mapping visualization?

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Hi, I wonder what software or R package can visualised RNA-seq reads:Genome mapping dataset like this image?

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written by qingxiangg • qingxiangg

1 answer

Pretty and (or should I say but?) uninformative. Bar charts will do a better job of conveying information here.

edit: sorry, I forgot about your question. See ggplot coord_polar.

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written by h.mon h.mon

Thanks a lot mon! Muhahahah I like this comment, informative is definitely important.

I'll try coord_polar.

Thanks again!

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written by qingxiangg • qingxiangg

If the plot is meant to show the percentages of the different categories, in my opinion it pretty informative. I would rearrange the legend though... (starting with total, total mapped, etc.).

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written by Benn Benn

Moved as an answer, I do not like seeing posts which look answered though the answer is hiding in comments. This increases the overall Biostars stats as well and I do this regularly. Hope its ok!

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written by Sukhi Singh Sukhi Singh

It is fine by me, I just didn't feel my answer was detailed enough so seemed more appropriate as a comment.

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written by h.mon h.mon

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