GC content of Refseq gene
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Repitools has a function for calculating gcContent called as gcContentCalc
Minimal example from the package.
require(BSgenome.Hsapiens.UCSC.hg18)
TSSTable <- data.frame(chr = paste("chr", c(1,2), sep = ""), position = c(100000, 200000))
gcContentCalc(TSSTable, 200, organism=Hsapiens)
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Sukhi Singh
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Sukhi Singh
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