How to find chromosome coordinates based on gene locus
I have full file comprising of list of gene locus.How can I find corresponding chromosome coordinates for each entry ?Is there any program or command(for example,using ncbi utilities) for the task?
For example,I have following data:
locus
AT1G01073
AT1G01115
AT1G01471
AT1G02320
AT1G02350
AT1G02391
AT1G02490
AT1G03022
AT1G03106
AT1G03200
AT1G03240
AT1G04171
AT1G04501
I need to find chromosome coordinates for all of them.
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1 answer
Go to
http://www.ncbi.nlm.nih.gov/genome/proteins/4?genome_assembly_id=22492&gi=240254421
And look for the genes or download the annotation tables for all the chromosomes and then do a search on them,
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