Question

The difference between Affymetrix and Agilent

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8.3 years ago

vahideh ▴ 20

Hi!

How can I know that my array in the Limma package is Affymetrix or Agilent?

Thank you

affymetrix agilent • 3.8k views

ADD COMMENT • link updated 21 months ago by Ram 43k • written 8.3 years ago by vahideh ▴ 20

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Normally one knows what one payed for, had a collaborator run, downloaded...

ADD REPLY • link 8.3 years ago by Devon Ryan 104k

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Are you bulk analysing GEO data or something?

ADD REPLY • link 7.9 years ago by russhh 5.7k

score 1 · Answer 1 · 2016-05-26

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7.9 years ago

Antonio R. Franco ★ 5.1k

Affimetrix use to use CEL files, and Agilent txt files instead

ADD COMMENT • link 7.9 years ago by Antonio R. Franco ★ 5.1k

score 0 · Answer 2 · 2016-05-26

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7.9 years ago

Benn 8.3k

This is kind of a strange question... Normally you'll have to read in your arrays yourself, so how can you not know what array source it is?

Maybe you'll have to explain a bit more about your situation??

ADD COMMENT • link 7.9 years ago by Benn 8.3k