Hello every one I used the following tophat command to get thout file. tophat -p 5 -o WS001_R1_thout --library-type=fr-firststrand -G Documents/Shaima/Seq/Pros/S/Rn6/Rn6.gtf Documents/Shaima/Seq/Pros/S/Rn6/Rn6_index Documents/Shaima/Seq/Pros/S/WS020_S6_L002_R1_001.fastq Documents/Shaima/Seq/Pros/S/WS020_S6_L002_R2_001.fastq The …
Hello everyone I have RNA seq data from two different experiments, but both experiments are related to one factor (alcohol effect). The first one has …
Hello everyone Hello everyone I have RNA seq data, I am interested to Identifying Independent and Dependent Variables between two groups. Except PCA, is there …
Try Panther, DAVID, KEGG or more advanced Gene Set Enrichment Analysis.
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PS: exact duplicate of Is There A Free Alternative To Ingenuity Pathway Analysis?