How to handle missing values using Expectation Maximization

Question

[marwa.cs91]

Hello all,

I have map, ped files. How can I use plink to apply Expectation Maximization algorithm (EM) in order to handle missing values?

Thanks in advance

Answer 1

[Jean-Karim Heriche]

Would this post be relevant ? Otherwise, you could have a look at the R package imputeMDR.