Read Simulation With Mason - Snp Positions
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12.2 years ago
aindap ▴ 120

Hi,

I am using mason to simulate Illumina sequencing reads. One of the options to the program in the haplotype snp rate (-hi) which is default to .001. What's not clear to me is where mason records the positions of SNPs, once its completed its simulation. Can anyone help clear up this confusion for me? Thanks for your help!

read simulation illumina • 2.7k views
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