further combining de novo isotigs

Hi,

I have some RNAseq data which has been de novo assembled by trinity in BGI. The organism is supposed to have 6000 to 7000 genes but I have 120000 isotigs after the assembly. I am wondering if there is a way or a software which can further assemble these isotigs.

PS, the genome is not available.

Thanks a lot and kind regards,

Pezhman

rna-seq assembly

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updated 4.0 years ago by Ram

• written 10.7 years ago by pezhmansafdari •

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