what does rsem.genesnormalised_result files in tcga database suggest
I have downloaded BRCA patient data from TCGA. There is rsem.genes.normalised_result file associated with each patient id (TCGA barcode). The data that I have downloaded is a matched tumor/normal (blue colored tabs). My question is: does the normalised values in rsem.genes.normalised_result files present normalise data of a gene in one sample(either tumor or matched normal)? or does it present the normalised score of a gene between two samples (tumor vs normal) of a patient?
Thanks
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Have you checked this previous discussion? Interpreting TCGA .rsem.genes.results and .rsem.genes.normalized_results files.