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cafelumiere12
cafelumiere12
Reputation:
80
Joined:
13.1 years ago
Last seen:
9.0 years ago
Location:
United States

about me

Latest posts by user
0 votes
1 reply
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Comment: C: Amzon EC2 for bioinformatics, genomics, NGS analysis
written by cafelumiere12 cafelumiere12
0 votes
0 replies
1 view
Comment: C: TCGA data set with both expression (rna seq/ microarray) and exome seq of same
written by cafelumiere12 cafelumiere12
1 vote
4 replies
3.9K views
TCGA data set with both expression (rna seq/ microarray) and exome seq of same samples?
tcga cbioportal cgdsr
updated by Biostar Biostar • written by cafelumiere12 cafelumiere12
0 votes
1 reply
3.8K views
varscan v2.3.9 filter Parse exception
varscan
updated by jlx0248 • jlx0248 • written by cafelumiere12 cafelumiere12
0 votes
1 reply
4.7K views
CNV analysis using the ExomeDepth R Package
exomedepth r cnv
updated by Ram Ram • written by cafelumiere12 cafelumiere12
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0 replies
3.2K views
CNV analysis from SNP6.0 data using Affymetrix power tools
cnv apt-copynumber snp affymetrix
updated by Ram Ram • written by cafelumiere12 cafelumiere12
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0 replies
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Comment: Comment: edgeR design matrix gives different results for the same data?
updated by Ram Ram • written by cafelumiere12 cafelumiere12
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1 reply
445 views
edgeR design matrix gives different results for the same data?
design-matrix edger
updated by Ram Ram • written by cafelumiere12 cafelumiere12
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Comment: C: Got fewer DE genes after applying bioconductor genefilter for edgeR analysis?
written by cafelumiere12 cafelumiere12
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1 reply
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Comment: Comment: Got fewer DE genes after applying bioconductor genefilter for edgeR analysis?
updated by Ram Ram • written by cafelumiere12 cafelumiere12
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Comment: C: Got fewer DE genes after applying bioconductor genefilter for edgeR analysis?
written by cafelumiere12 cafelumiere12
1 vote
5 replies
4.4K views
Got fewer DE genes after applying bioconductor genefilter for edgeR analysis?
genefilter r rna-seq edger
updated by Ram Ram • written by cafelumiere12 cafelumiere12
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Comment: C: Your Thoughts On A "Standard" Pipeline To Process Illumina 450K Data
written by cafelumiere12 cafelumiere12
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Comment: Comment: HTSeq-count high number of no_feature
updated by Ram Ram • written by cafelumiere12 cafelumiere12
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1 reply
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Comment: Comment: HTSeq-count high number of no_feature
updated by Ram Ram • written by cafelumiere12 cafelumiere12
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0 replies
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Comment: C: HTSeq-count high number of no_feature
written by cafelumiere12 cafelumiere12
0 votes
1 reply
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Comment: C: HTSeq-count high number of no_feature
written by cafelumiere12 cafelumiere12
1 vote
8 replies
17K views
HTSeq-count high number of no_feature
htseq-count rna-seq
updated by Ram Ram • written by cafelumiere12 cafelumiere12
0 votes
0 replies
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Comment: C: TCGA Tumor matched Normal and Normal matched Tumor do not have the same number o
updated by Ram Ram • written by cafelumiere12 cafelumiere12
3 votes
3 replies
8.2K views
Differential expression analysis for TCGA level 3 RNASeqV2 data?
rna-seq r edger
updated by Ram Ram • written by cafelumiere12 cafelumiere12
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