High througput BLAST-analysis
Is there a simple and automated way to do a BLAST analysis of 900 genes to find clusters... or should I make a 900x900 table and compare each gene individually with each other?
Thank you for your help!
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Sishuo Wang
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noemichael •
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noemichael •
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OrthoMCL is another good choice in addition to CD-HIT as mentioned by Neilfws. Alternatively, you might want to use SiLiX which is very fast and could be used for both nucleotide sequences or amino acid sequences.
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