SNP calling tool for metagenomic sample
Anybody knows if its make sense to use SNP calling tools for clinical metagenomics samples. I'm pretty new on Metagenomic and I heard there could be some problems of detect SNP in clinical metagenomic sample that was aligned to reference.
• 2,393 views
•
link
updated
by
Ram
•
written
by
benarnon •
•
written
by
benarnon •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
best pipeline/practice for analyzing WES for germline and somatic variant calling
written by epigene
-
Calculate missing genotypes per sample with plink2
written by LDT •
-
How to add sequence information to vcf from MPileup
written by helge.fluess •
-
Detecting Structural variants in sequencing data
written by Glen •
-
How to make new VCF files myself?
written by Amirosein
-
Tools to detect SNP supporting read count in each bam file
written by sckinta
-
Forum: Multisample SNP/SNV calling - What's your favourite method?
written by amcrisan
-
How to calculate organism relative abundance from Illumina metagenomic data?
written by nkuyfq
-
Tool: Software For Detecting Differential Abundance In Meta-Genomic Samples
written by Istvan Albert
-
Metagenomic Assembler For Windows
written by marcia.astorga •
