unzipping my file in fedora
Sorry guys,
I tried to unpack my file but I could not, what I did wrong here please?
[izadi@lbox161 ~]$ cd Downloads
[izadi@lbox161 ~/Downloads]$ ls
BY4741_JRIS00000000_cds.fsa.gz rna_genomic.fasta.gz
Fereshteh.R S288C_reference_genome_Current_Release.tgz
orf_coding_all.fasta (1).gz S288C_reference_genome_R64-2-1_20150113
orf_coding_all.fasta.gz
[izadi@lbox161 ~/Downloads]$ tar -xzvf rna_genomic.fasta.gz
tar: This does not look like a tar archive
tar: Skipping to next header
tar: Exiting with failure status due to previous errors
1 answer
You're trying to untar the file. It's not a tar archive. A tar archive is a collection of files condensed into a single file for better portability. The entire archive can also be gzipped. The command you typed was an attempt to decompress and unpack a tar archive.
What you have is likely a single file compressed with GZIP.
Try gunzip rna_genomic.fasta.gz
Sorry,
[izadi@lbox161 ~]$ apt-get install zip
apt-get: Command not found.
[izadi@lbox161 ~]$ bash
[izadi@lbox161 ~]$ apt-get install zip
bash: apt-get: command not found...
[izadi@lbox161 ~]$ # apt-get install zip
[izadi@lbox161 ~]$ apt-get install unzip
bash: apt-get: command not found...
[izadi@lbox161 ~]$ # apt-get install unzip
[izadi@lbox161 ~]$ # yum install zip
[izadi@lbox161 ~]$ # yum install unzip
[izadi@lbox161 ~]$ cd /usr/data/nfs6/izadi
[izadi@lbox161 izadi]$ $ unzip fastqc_v0.11.3.zip
bash: $: command not found...
[izadi@lbox161 izadi]$ unzip fastqc_v0.11.3.zip
Archive: fastqc_v0.11.3.zip
End-of-central-directory signature not found. Either this file is not
a zipfile, or it constitutes one disk of a multi-part archive. In the
latter case the central directory and zipfile comment will be found on
the last disk(s) of this archive.
unzip: cannot find zipfile directory in one of fastqc_v0.11.3.zip or
fastqc_v0.11.3.zip.zip, and cannot find fastqc_v0.11.3.zip.ZIP, period.
Try file fastqc_v0.11.3.zip
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Matt Shirley
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