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getting the whole of rRNA.fa for ecoli

Hey guys,

I wanna map my reads on ecoli rRNA sequence by bowtie2. From where can I download the Ecoli_rRNA.fa please?

I went through this link Download Rrna Sequences already but in NCBI nucleotide I found many hits for ecoli. I just want an Ecoli_rRNA.fa sequence

ribo-seq bowtie2
• 2,218 views • link
updated by Ram Ram • written by zizigolu zizigolu

http://lmgtfy.com/?q=Ecoli_rRNA.fa

Also, you do understand that anyone can create a file titled Ecoli_rRNA.fa and put whatever into it. There are 100s to 1000s of E. coli strains. The file name implies ribosomal RNA but you don't even specify if it's the small or large one that you're after. More than likely the small one, but still. If you put a little thought and context to your questions, you're more likely to receive more thoughtful answers too.

• 0 views • link
updated by Ram Ram • written by 5heikki 5heikki

anyway thank you

• 0 views • link
written by zizigolu zizigolu

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