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Forum: ipython notebooks on bioinformatics and genomics

I am looking for a collection of ipython notebooks for basic bioinformatics, evolutionary and genomics analysis. Please post here if you are aware of any. Thank you.

python
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updated by Ram Ram • written by Pappu Pappu

Did you try Google? If so, you would have seen at least one resource. You can then change this to a Forum post and add the resources that you have found, and this way, it would benefit the entire community.

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written by Ram Ram

4 answers

I have developed quite a few:

In terms of scope, the ones related to the book cover a lot of areas.

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written by tiagoantao tiagoantao

Ben Langmead has a bunch from his recent bioinformatics course.

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updated by Ram Ram • written by Lynxoid Lynxoid

This is a pretty awesome gallery of ipython notebooks from github that span a large range of subjects https://github.com/ipython/ipython/wiki/A-gallery-of-interesting-IPython-Notebooks#mathematics-physics-chemistry-biology

This one is quite impressive and fully dedicated to bioinformatics http://readiab.org/

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updated by Ram Ram • written by cmdcolin cmdcolin

Under Lectures on Python Programming for Biologists

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updated by Ram Ram • written by rtliu rtliu

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