Hello everyone,
I have a bed file containing some genomic features with coordinates
I would like to extract automatically two information concerning the UCSC conservation :
I remember there is a ucsc tool that do that but I lost its name, any idea ?
Thanks
Rad
•
written
by
Radhouane Aniba
The conservation tracks are stored in a set of bigwig files: http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/phastCons46way/
You can access those data using the "bigwig" binaries from the jkent package: http://hgdownload.cse.ucsc.edu/admin/exe/
•
written
by
Pierre Lindenbaum
Yes Pierre, I am looking actually for these sources, but cannot find source files for consForBed for example which could solve my problem, any idea where to find it ?
got all jkent package and I will compile it, thanks pierre
Log in to answer this question.
