RNA binding motif
I am scanning an RNA binding motif which is CTCC and I am scanning it in the corresponding genomic sequence of the exonic positions, my question is that when scanning the corresponding genomic sequence, do I scan it as GAGG for forward stranded sequences and as GGAG for reverse, is that correct?
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Aishwarya Kulkarni
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Yes but if I have the corresponding genomic sequence do I scan for it's complement?
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