PBcR using less than 25X for error correction in PacBIo

Hello everyone,

When running PBcR for pacbio data, how do I select only the longest 15X coverage for assembly rather than the default 25X?

Thanks,

-Dave

pacbio pbcr error error-correction

• 2,415 views • link

updated 4.1 years ago by Ram

• written 11.4 years ago by merodev

1 answer

Hi, you can use "assemble = 15". Use it in command line or spec.file.

• 0 views • link

updated 4.1 years ago by Ram

• written 11.3 years ago by orange •

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