This is a test version of Biostars. For the public version, visit https://www.biostars.org.
TCGA Breast Cancer - Gene expression (Agilent Platform) - Red and green channels

Hello,

I am doing a study with TCGA database on breast cancer. I'd like to collect the data on gene expression using Agilent microarrays.

Do you know how and where can I collect the rough results concerning the red and green channel expression ? (TCGA only provide the log ratio red/green).

Thank you for your help

tcga agilent brca gene-expression
• 3,323 views • link
updated by Ram Ram • written by ariane.odjo • ariane.odjo

1 answer

The Level 1 TCGA data should include those details.

• 0 views • link
updated by Ram Ram • written by Sean Davis Sean Davis

Thank you very much. Do you know the exact column (the level 1 files are really huge?

• 0 views • link
updated by Ram Ram • written by ariane.odjo • ariane.odjo

Log in to answer this question.

More posts like this