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Generate GVF file from VCF file

I have a VCF file and I want to generate gVCF file from that. http://blog.kokocinski.net/index.php/gvf-format?blog=2

Does anyone know of a converter that convert a VCF file into a GVF file?

Thanks

vcf
• 4,447 views • link
updated by Ram Ram • written by win win

Do you want a GVF or a gVCF? it isn't clear?

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updated by Ram Ram • written by Zev.Kronenberg Zev.Kronenberg

GVF (not a gVCF)

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updated by Ram Ram • written by win win

2 answers

VAAST has a VCF to GVF converter: http://www.yandell-lab.org/software/vaast.html

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updated by Ram Ram • written by Zev.Kronenberg Zev.Kronenberg

Also, The following script works well for this purpose.

https://github.com/Test-Blu/GVF2VCF_Convertor_TestBlu

• 0 views • link
written by Alireza • Alireza

This script does the opposite of what this post is looking for. Do you have any suggestions for converting VCF to GVF?

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updated by Ram Ram • written by Brent • Brent

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