More posts like this
-
controls for chip-seq real time PCR of h4k16Ac (293 cells)
written by adielb 0Hey everyone, I'm preforming a Chip-seq experiment on H4K16Ac using HEK293 cells. I would like to have both positive and negative controls for real time …
-
News: Variant Analysis Online Course @ Edinburgh Genomics
written by Edinburgh Genomics Training 4***Variant Analysis Online Course*** **22-25 October** **Register here**: https://genomics.ed.ac.uk/event/variant-analysis/ Gain a solid introduction to short variant discovery (germline & somatic) from short-read data in this …
-
WGCNA tutorial docs needed: Horvath Lab site down
written by ellen.francis 2I'm a new user of WGNA and am interested in comparing and contrasting networks. I know there were several tutorials linked to the Horvath lab …
-
Ribo-Seq Analysis
written by phoenix.sum13 9Hi everyone, What are some of the latest/advanced tools for ribo-seq analysis? If anyone here with experience in ribo-seq can guide me through or recommend …
-
RepBase27.07.fasta.tar.gz
written by ar14g12 1Hi, Does anyone have a copy of RepBase27.07.fasta.tar.gz? I'll need it for TE analysis, I don't have any subscription to Repbase, this would be really …
-
Using Illumina COVIDSeq Kit to sequence other viruses other than SARS-COV-2
written by phantom_mafia 0I am interested in trying the COVIDSeq kit offered by Illumina in sequencing other viruses, as I was told this was possible by substituting the …
-
GATK FilterMutectCalls parameter max germline posterior ?
written by jackyen 0Hello, I'm working on a pipeline and running mutect2. I came across the FilterMutectCalls which can add some annotation on the variants. I'm particularly interested …
-
SNP calling using cancer cell lines
written by JJ 77Hi all, I have two questions concerning SNP calling using cancer cell lines: Comparing two human genomes on average 1 in 1000 to 1300 nucleotides …
-
Sequence similarity between two genes
written by yunkyoung0225 0Can anyone explain what does it mean that two genes share similar non-coding sequences? When I align two genes that I am interested in, there …
-
Recommendations For Dn/Ds Ratio Analyses Software?
written by Dj111 5What are the state of the art programs/libraries for performing dn/ds analyses? I know PAML can do it, but I'm wondering if there are others. …