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Tablet software to find SNPs with bam File

Hi,

I have my datas of NGS by illumina which sequenced and analyzed in bam files of tablet software but I can not understand the options and meaning of topics like: in this ,,if anybody knows to guide me ?

M00358:6:000000000-A6HCE:1:1114:8253:87 ,,,, or Cigar.....M or the BLUE and Green strap (band) shows orientation.

snp softwareerror next-gen sequencing
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updated by Ram Ram • written by Elnaaz • Elnaaz

Hi,

I have my datas of NGS by illumina which sequenced and analyzed in bam files of tablet software but I can not understand the options and meaning of topics like: in this ,,if anybody knows to guide me?

-M00358:6:000000000-A6HCE:1:1114:8253:87 ,,,, or Cigar.....M or the BLUE and Green strap (band) shows orientation?

-What is exactly difference between read length and fragment length?

What is the coverage depth?

What is insert length?

What is properly and improperly paired?

• 0 views • link
updated by Ram Ram • written by Elnaaz • Elnaaz

Can you please post your question correctly ?

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written by Ashutosh Pandey Ashutosh Pandey

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