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Arlequin Use For Snp

I am preparing my thesis about the SNP developed by Sanchez 52 SNP, I would like to determine (using the Arlequin Software) the following statistical parameters:

  • Allele frequencies
  • Hardy Wenberg equilibrium
  • Linkage disequilibrium
  • FST
  • Population differentiation
  • Amova

However, I can’t use this Software, so, if you don’t mind, please help me to use it (Introduction of the raw data in the Arlequin). If you are interested, I could send you these raw data for analysis

snp frequency
• 5,266 views • link
updated by Michael Schubert Michael Schubert • written by B Ham • B Ham

Please tell us what the problem really is. What did you already try? Did you read the manual? What is the error message? Did you use the mailling lists for the software? And I would be reluctant to send my data around, if it is not public data already. An excerpt from the header should be enough, that way that will also leave some work for you and your thesis to be performed by yourself ;)

• 426 views • link
written by Michael Dondrup Michael Dondrup

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