Hello

Can you please help me with diffbind package.

As I understood I should create a csv file with names of bed files with input, control and peaks bed files of peaksets.

Are all of these files required for analysis? Can I do only with files with peaks? I'm trying to do without initial files (just don't have them) writing a csv file as follows:

SampleID,Peaks
1,2A.peaks.bed
2,3A.peaks.bed
3,5A.peaks.bed

But using this in R I have a mistake:

> sets = dba(sampleSheet="sample.csv")
1     NA raw
Error in Summary.factor(c(1L, 1112L, 2223L, 3334L, 4445L, 5556L, 6592L,  : 
  max not meaningful for factors
Warning:
In read.table(samplesheet, sep = ",", stringsAsFactors = F, header = T) :
  incomplete final line found by readTableHeader on 'sample.csv'