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Finding Palindromes(perfect palindromes) in more than one protein sequences using perl

I am a newbie in Perl (Regular Expressions). I need a example on how to write a program for finding out palindromes (perfect) in more than one protein sequences (let it be 4 sequence with 200 amino acids in number, in a file) I have to filter out, the palindromes and the position of palindromes present in the sequences.

I have gone through many articles, but couldn't get any better idea.

Please suggest me some techniques and programs for this.

alignment perl algorithm sequence
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updated by Ram Ram • written by rajkishore.ouatbi • rajkishore.ouatbi

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written by Neilfws Neilfws

Hello rajkishore.ouatbi!

We believe that this post is does not fit the main topic of this site.

Answer accepted in cross-post at Stack Overflow

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

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written by Neilfws Neilfws

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