This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Convert Blast m8 output to XML

I've used usearch's ublast feature on my datasets. I'm now wanting to use a package such as findorf on them. However, this requires XML formatted data, which usearch does not support as output. I have my files in a tab separated file, equivalent to NCBI blast m8 format. How can I go about converting these to XML? I've been searching around for a script, but haven't been able to find one. This doesn't seem like it's a very common task.

blast

0 answers

No answers yet.

Log in to answer this question.