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Comment: C: using hclust object from FactoMineR::HCPC to force clustering in pheatmap
3.8 years ago by komal.rathi ★ 4.1k
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Comment: C: Are there publicly available metagenomic RNA-Seq datasets?
updated 4.3 years ago by 43k • written 9.9 years ago by ★ 4.1k
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1
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Comment: C: Genomic Features - makeTranscriptDbFromGFF()
updated 4.3 years ago by 43k • written 9.9 years ago by ★ 4.1k
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Comment: C: Genomic Features - makeTranscriptDbFromGFF()
updated 4.3 years ago by 43k • written 9.9 years ago by ★ 4.1k
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2
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6.6k
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Comment: C: FastQC and EstimateLibrarySize (Picard): Library Complexity and/or Duplicated Re
updated 4.3 years ago by 43k • written 9.9 years ago by ★ 4.1k
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Comment: C: Download all eQTL data for all the 9 tissues from GTEx Portal
updated 4.3 years ago by 43k • written 9.9 years ago by ★ 4.1k
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Comment: C: How does DESeq2 handle the read-counts assigned to special counters in HTSeq-cou
updated 4.4 years ago by 43k • written 10.1 years ago by ★ 4.1k
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Comment: C: DESeq and Limma+Voom Normalization for Rna-Seq Data Using Ercc Spike-In
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 4.1k
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1
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6.3k
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Comment: C: DESeq and Limma+Voom Normalization for Rna-Seq Data Using Ercc Spike-In
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 4.1k
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32k
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Comment: C: Calculate The Frequency Of Nucleotides At Each Position In An Mpileup File
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 4.1k
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8.4k
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Comment: C: snakemake: pipeline failed with MissingOutputException
4.5 years ago by komal.rathi ★ 4.1k
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1
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12k
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Comment: C: gtf file for htseq count
updated 4.6 years ago by 43k • written 9.5 years ago by ★ 4.1k
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5.7k
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Comment: C: 23andme: Convert Human Assembly Build 36 to Build 37
updated 4.6 years ago by 43k • written 9.5 years ago by ★ 4.1k
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1
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6.0k
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Comment: C: HTSeq count (reverse count with paired-end data)
updated 4.6 years ago by 43k • written 9.9 years ago by ★ 4.1k
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0
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32k
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Comment: C: Calculate The Frequency Of Nucleotides At Each Position In An Mpileup File
updated 4.6 years ago by 43k • written 10.1 years ago by ★ 4.1k
0
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1
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32k
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Comment: C: Calculate The Frequency Of Nucleotides At Each Position In An Mpileup File
updated 4.6 years ago by 43k • written 10.1 years ago by ★ 4.1k
0
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0
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32k
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Comment: C: Calculate The Frequency Of Nucleotides At Each Position In An Mpileup File
updated 4.6 years ago by 43k • written 10.1 years ago by ★ 4.1k
0
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1
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32k
views
Comment: C: Calculate The Frequency Of Nucleotides At Each Position In An Mpileup File
updated 4.6 years ago by 43k • written 10.1 years ago by ★ 4.1k
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0
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3.9k
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Comment: C: Count The Number Of A, T, G And C At Specific Genomic Locations For Multiple Rna
updated 4.6 years ago by 43k • written 10.1 years ago by ★ 4.1k
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9.7k
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Comment: C: Download all eQTL data for all the 9 tissues from GTEx Portal
4.6 years ago by komal.rathi ★ 4.1k
1
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0
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4.5k
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Comment: C: How to get known canonical transcript information from UCSC for a specific genco
5.0 years ago by komal.rathi ★ 4.1k
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0
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5.9k
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Comment: C: GATK ASEReadCounter: Downstream analysis for identifying allele specific express
5.3 years ago by komal.rathi ★ 4.1k
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1
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4.2k
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Comment: C: RSEM output interpretation
5.5 years ago by komal.rathi ★ 4.1k
0
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1
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1.6k
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Comment: C: How to determine RNA-seq samples from dbGaP metadata
5.7 years ago by komal.rathi ★ 4.1k
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0
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2.5k
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Comment: C: Why does GFF prepared using dexseq_prepare_annotation shows different exon numbe
6.6 years ago by komal.rathi ★ 4.1k
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4.3k
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Comment: C: exon level quantification using htseq count
6.6 years ago by komal.rathi ★ 4.1k
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0
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2.2k
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Comment: C: Filter bam files using a bed file: Why is the mate missing?
6.6 years ago by komal.rathi ★ 4.1k
0
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1
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4.3k
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Comment: C: exon level quantification using htseq count
6.6 years ago by komal.rathi ★ 4.1k
0
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1
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4.3k
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Comment: C: exon level quantification using htseq count
6.6 years ago by komal.rathi ★ 4.1k
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0
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8.7k
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Comment: C: htseq-count cannot find pysam
6.7 years ago by komal.rathi ★ 4.1k
0
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1
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4.8k
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Comment: C: How do I obtain germline mutation for TCGA samples?
6.8 years ago by komal.rathi ★ 4.1k
0
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1
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3.1k
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Comment: C: IGV color interpretation by insert size
6.8 years ago by komal.rathi ★ 4.1k
0
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1
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3.1k
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Comment: C: IGV color interpretation by insert size
6.8 years ago by komal.rathi ★ 4.1k
0
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1
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2.9k
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Comment: C: Detection of fusion events of Retrotransposons and genes/lncRNA from RNA-seq dat
6.9 years ago by komal.rathi ★ 4.1k
0
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1
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3.3k
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Comment: C: How to create an AffyBatch object using a data matrix?
7.1 years ago by komal.rathi ★ 4.1k
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0
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1.9k
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Comment: C: RNASeq differential expression: How to deal with few genes with extremely high e
7.1 years ago by komal.rathi ★ 4.1k
0
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0
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2.0k
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Comment: C: Is it possible/recommended to trim RNA-Seq reads to a specific length
7.2 years ago by komal.rathi ★ 4.1k
0
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0
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2.0k
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Comment: C: Is it possible/recommended to trim RNA-Seq reads to a specific length
7.2 years ago by komal.rathi ★ 4.1k
0
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1
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95k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
7.4 years ago by komal.rathi ★ 4.1k
0
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1
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2.9k
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Comment: C: Visualizing hg19 and hg38 FPKMs in a single plot
7.5 years ago by komal.rathi ★ 4.1k
0
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1
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2.9k
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Comment: C: Visualizing hg19 and hg38 FPKMs in a single plot
7.5 years ago by komal.rathi ★ 4.1k
0
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0
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2.1k
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Comment: C: TARGET Pediatric Cancer Code Table
7.5 years ago by komal.rathi ★ 4.1k
1
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0
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3.7k
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Comment: C: changing gtf file manually
7.6 years ago by komal.rathi ★ 4.1k
0
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0
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2.6k
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Comment: C: Convert specific regions in bam file to vcf and annotating the vcf
7.7 years ago by komal.rathi ★ 4.1k
0
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0
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2.6k
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Comment: C: Convert specific regions in bam file to vcf and annotating the vcf
7.7 years ago by komal.rathi ★ 4.1k
0
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0
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2.2k
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Comment: C: Identify genes with extracellular matrix domains
7.8 years ago by komal.rathi ★ 4.1k
0
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1
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2.2k
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Comment: C: Identify genes with extracellular matrix domains
7.9 years ago by komal.rathi ★ 4.1k
0
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1
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2.2k
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Comment: C: Identify genes that have domains sticking out in the extracellular matrix
7.9 years ago by komal.rathi ★ 4.1k
0
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0
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8.4k
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Comment: C: Affymetrix probeset IDs...
7.9 years ago by komal.rathi ★ 4.1k
1
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0
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2.9k
views
Comment: C: HTSeq result, most genes have 0 count?
7.9 years ago by komal.rathi ★ 4.1k
277 results • Page 1 of 6
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