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Comment:
Comment: NGS forensics: how to know if data is fabricated
5 days ago by
Jeremy Leipzig
22k
0
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1
reply
496
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Comment:
Comment: gvcf joint calling
5 days ago by
Jeremy Leipzig
22k
0
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1
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496
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Comment:
Comment: gvcf joint calling
6 days ago by
Jeremy Leipzig
22k
1
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0
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258
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Comment:
Comment: CombineGVCFs vs. MergeVcfs
17 days ago by
Jeremy Leipzig
22k
0
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1
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682
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Comment:
Comment: Why are the basics so complicated? Basic coverage filtering for VCF files
24 days ago by
Jeremy Leipzig
22k
0
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0
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305
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Comment:
Comment: Bioinformatics variant calling software
28 days ago by
Jeremy Leipzig
22k
0
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0
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235
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Comment:
Comment: AUC=1, is it possible after lasso regression?
4 weeks ago by
Jeremy Leipzig
22k
0
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1
reply
460
views
Comment:
Comment: I can't add VAF from population for all of my variants from VCF file
7 weeks ago by
Jeremy Leipzig
22k
1
vote
1
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494
views
Comment:
Comment: Snakemake rule that runs an assessment for once after completing other previous
8 weeks ago by
Jeremy Leipzig
22k
1
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1
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494
views
Comment:
Comment: Snakemake rule that runs an assessment for once after completing other previous
8 weeks ago by
Jeremy Leipzig
22k
1
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0
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1.5k
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Comment:
Comment: Novel sparse optimisation for high accuracy cancer classification on the 33-canc
8 weeks ago by
Jeremy Leipzig
22k
0
votes
2
replies
494
views
Comment:
Comment: Snakemake rule that runs an assessment for once after completing other previous
8 weeks ago by
Jeremy Leipzig
22k
1
vote
1
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463
views
Comment:
Comment: Snakemake: how to define output from a dictionary according to wildcard
9 weeks ago by
Jeremy Leipzig
22k
0
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256
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Comment:
Comment: Resolution of ambiguous calls in germline vcf
9 weeks ago by
Jeremy Leipzig
22k
0
votes
1
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805
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Comment:
Comment: What is the expected number of common/mutual/shared SNVs between two, three, fou
10 weeks ago by
Jeremy Leipzig
22k
0
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805
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Comment:
Comment: What is the expected number of common/mutual/shared SNVs between two, three, fou
10 weeks ago by
Jeremy Leipzig
22k
1
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1
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31k
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Comment:
Comment: List of cloud genomics companies
10 weeks ago by
Jeremy Leipzig
22k
1
vote
0
replies
24k
views
Comment:
Comment: Difference between tSNE and PCA analysis
10 weeks ago by
Jeremy Leipzig
22k
0
votes
1
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448
views
Comment:
Comment: how to extract variants from the vcf.gz files linked below?
10 weeks ago by
Jeremy Leipzig
22k
0
votes
0
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31k
views
Comment:
Comment: List of cloud genomics companies
11 weeks ago by
Jeremy Leipzig
22k
1
vote
0
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31k
views
Comment:
Comment: List of cloud genomics companies
11 weeks ago by
Jeremy Leipzig
22k
1
vote
1
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367
views
Comment:
Comment: Linear Mixed-Effects Model Coefficient Interpretation
11 weeks ago by
Jeremy Leipzig
22k
1
vote
1
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679
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Comment:
Comment: difference betwween hail and plink
12 weeks ago by
Jeremy Leipzig
22k
0
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0
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403
views
Comment:
Comment: How to reference input variable in output section of rule of Snakemake rule
12 weeks ago by
Jeremy Leipzig
22k
0
votes
1
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467
views
Comment:
Comment: 1000 Genome: Cause of duplicate variants with different genotypes
12 weeks ago by
Jeremy Leipzig
22k
0
votes
1
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467
views
Comment:
Comment: 1000 Genome: Cause of duplicate variants with different genotypes
12 weeks ago by
Jeremy Leipzig
22k
0
votes
0
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565
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Comment:
Comment: What tools exist for filtering hundreds of VCFs (and annotated into VCFs in txt
3 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
412
views
Comment:
Comment: How quickly can an SRA submission proceed directly from S3
3 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
412
views
Comment:
Comment: How quickly can an SRA submission proceed directly from S3
3 months ago by
Jeremy Leipzig
22k
0
votes
0
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819
views
Comment:
Comment: Isolating and extracting regions in VCF file
3 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
717
views
Comment:
Comment: GIAB Benchmarking
3 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
463
views
Comment:
Comment: Tool to Create Sequence Logo Plot with Indels or Alignment-Aware Position Freque
3 months ago by
Jeremy Leipzig
22k
2
votes
2
replies
1.2k
views
Comment:
Comment: Problem with Mamba
4 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
730
views
Comment:
Comment: Multiallelic variants when merging VCF's with GLnexus
4 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
730
views
Comment:
Comment: Multiallelic variants when merging VCF's with GLnexus
4 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
1.7k
views
Comment:
Comment: How to query 1000 genomes project VCF files for specific regions without downloa
4 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
730
views
Comment:
Comment: Multiallelic variants when merging VCF's with GLnexus
4 months ago by
Jeremy Leipzig
22k
3
votes
0
replies
896
views
Comment:
Comment: Individual vs. joint call VCFs
4 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
896
views
Comment:
Comment: Individual vs. joint call VCFs
4 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
2.7k
views
Comment:
Comment: How to display a VCF/BCF file or stream as a paginated table in a python web fra
4 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
313
views
Comment:
Comment: Bgen file not being opened by PRSice
5 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
937
views
Comment:
Comment: How to create a Venn Diagram for overlapping SVs from a merged VCF
5 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
905
views
Comment:
Comment: Isaac aligner V4 genome aligner questions
6 months ago by
Jeremy Leipzig
22k
1
vote
0
replies
477
views
Comment:
Comment: How to find the Allele Number (AN) of a variant not reported on gnomAD
6 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
937
views
Comment:
Comment: How to create a Venn Diagram for overlapping SVs from a merged VCF
6 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
937
views
Comment:
Comment: How to create a Venn Diagram for overlapping SVs from a merged VCF
6 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
723
views
Comment:
Comment: Calculating ROC50 in R
6 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
723
views
Comment:
Comment: Calculating ROC50 in R
6 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
954
views
Comment:
Comment: N50 value of bacterial assembly is not half of total assembly size
6 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
682
views
Comment:
Comment: Confirming called variants
6 months ago by
Jeremy Leipzig
22k
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