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Answer: Answer: Differential Expression with limma: Contrast and Design Matrix, combinatorial ap
5 days ago by dariober 14k
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Comment: Comment: removeBatchEffect explained using base R linear models
13 days ago by dariober 14k
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690
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Comment: Comment: BRAKER3 genome annotation
4 weeks ago by dariober 14k
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Answer: Answer: BRAKER3 genome annotation
4 weeks ago by dariober 14k
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Answer: Answer: How I know if it is a batch effect or are real differences between my controls a
5 weeks ago by dariober 14k
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288
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Comment: Comment: permutation test in edgeR
6 weeks ago by dariober 14k
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Answer: Answer: Error Codes in Snakemake
6 weeks ago by dariober 14k
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Comment: Comment: CCA with random effects model
6 weeks ago by dariober 14k
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367
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Comment: Comment: Volcano Plot Output Inquiry: Graphs Facing Down
7 weeks ago by dariober 14k
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414
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Comment: Comment: Can questions and answers on biostars be asked only in English? Can't I use Russ
8 weeks ago by dariober 14k
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865
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Answer: Answer: t-test in two groups, multiple rows
9 weeks ago by dariober 14k
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458
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Answer: Answer: Snakemake's SyntaxError positional argument follows keyword argument
9 weeks ago by dariober 14k
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416
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Answer: Answer: I do not understand how to get total peaks from MACS2 shown to me. What mistake(
10 weeks ago by dariober 14k
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205
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Comment: Comment: Testing the effect of the salinity water on abundance estimates
10 weeks ago by dariober 14k
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500
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Answer: Answer: Snakemake: how to define output from a dictionary according to wildcard
11 weeks ago by dariober 14k
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447
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Comment: Comment: Why statistic test should I use?
3 months ago by dariober 14k
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1.1k
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Comment: Comment: Shrink logFC values after edgeR
3 months ago by dariober 14k
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2.2k
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Comment: Comment: Determining computer time required
4 months ago by dariober 14k
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409
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Answer: Answer: What featuretype I should select for featureCounts tool.
4 months ago by dariober 14k
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1.4k
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Comment: Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
4 months ago by dariober 14k
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1.0k
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Comment: Comment: Snakemake rule error
5 months ago by dariober 14k
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1.0k
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Answer: Answer: Snakemake rule error
5 months ago by dariober 14k
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726
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Comment: Comment: Is there a good software to generate test genomics data?
5 months ago by dariober 14k
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659
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Comment: Comment: Strand bias in supplementary alignments from Nanopore
6 months ago by dariober 14k
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659
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Strand bias in supplementary alignments from Nanopore
minimap2 nanopore strand
updated 6 months ago by ★ 3.8k • written 6 months ago by 14k
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898
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Answer: Answer: Snakemake alignment script
7 months ago by dariober 14k
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1.6k
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Comment: Comment: geom_signif() uses t-test to compare between more than 3 groups... Isn't this wr
7 months ago by dariober 14k
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1.0k
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Comment: Comment: Elusive syntax error in Snakefile
8 months ago by dariober 14k
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1.9k
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Comment: Comment: How to limit fasta header to 40 characters?
8 months ago by dariober 14k
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625
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Answer: Answer: Error in snakemake with working shell script
9 months ago by dariober 14k
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1.4k
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Answer: Answer: how to run FacetsSuite wrapper scripts on command line
12 months ago by dariober 14k
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688
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Comment: Comment: grep value from html file
12 months ago by dariober 14k
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4.5k
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Answer: Answer: I want to correct the erroneous barcode file, and the Python code that I've writ
13 months ago by dariober 14k
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2.9k
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Comment: Comment: How to use CAFE from Orthofinder Results
15 months ago by dariober 14k
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2.9k
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Answer: Answer: How to use CAFE from Orthofinder Results
15 months ago by dariober 14k
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2.3k
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Answer: Answer: GSEA on nonmodel organisms
15 months ago by dariober 14k
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745
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Comment: Comment: How to obtain highest level GO term from go_id?
16 months ago by dariober 14k
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745
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Answer: Answer: How to obtain highest level GO term from go_id?
16 months ago by dariober 14k
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1.7k
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Answer: Answer: VEP with CONDA, installing annotation sources manually, what is the right direct
17 months ago by dariober 14k
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1.3k
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Answer: Answer: How to install non-bioconda package in conda environment
17 months ago by dariober 14k
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3.0k
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Comment: Comment: Processing Fast5 files from ONT
17 months ago by dariober 14k
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3.0k
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Comment: Comment: Processing Fast5 files from ONT
17 months ago by dariober 14k
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3.0k
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Answer: Answer: Processing Fast5 files from ONT
17 months ago by dariober 14k
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448
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Answer: Answer: How can I identify housekeeping genes from scRNA-seq data?
17 months ago by dariober 14k
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1.0k
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Comment: Comment: runing R script on VCF dile in ubuntu
17 months ago by dariober 14k
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913
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Answer: Answer: How interpret question mark symbol strand column in GFF file?
17 months ago by dariober 14k
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970
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Comment: Comment: Graphic representation of distance between samples
18 months ago by dariober 14k
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970
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Answer: Answer: Graphic representation of distance between samples
18 months ago by dariober 14k
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1.4k
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Comment: Comment: Are package downgrades a necessary evil in Conda?
18 months ago by dariober 14k
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1.4k
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Comment: Comment: Are package downgrades a necessary evil in Conda?
18 months ago by dariober 14k
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