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2
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Comment: C: Interpretation of RNA seq pipeline in a paper
4.5 years ago by shawn.w.foley ★ 1.3k
2
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1
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1.4k
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Comment: C: Interpretation of RNA seq pipeline in a paper
4.5 years ago by shawn.w.foley ★ 1.3k
1
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1
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4.9k
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Comment: C: cutoff for expressed genes in DESeq2
4.6 years ago by shawn.w.foley ★ 1.3k
1
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1
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7.8k
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Comment: C: GSEA: Does a gene set really have positive and negative enrichment scores?
4.6 years ago by shawn.w.foley ★ 1.3k
1
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1
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1.9k
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Comment: C: How does one count unmapped transcripts ?
4.6 years ago by shawn.w.foley ★ 1.3k
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2
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1.5k
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Comment: C: How to extract lncRNA from CPC2 output?
4.6 years ago by shawn.w.foley ★ 1.3k
2
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0
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1.9k
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Comment: C: How does one count unmapped transcripts ?
4.6 years ago by shawn.w.foley ★ 1.3k
1
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0
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1.9k
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Comment: C: How does one count unmapped transcripts ?
4.6 years ago by shawn.w.foley ★ 1.3k
0
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0
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5.8k
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Comment: C: How to create ggplot for each dataframe in list and export them?
4.7 years ago by shawn.w.foley ★ 1.3k
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5.8k
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Comment: C: How to create ggplot for each dataframe in list and export them?
4.7 years ago by shawn.w.foley ★ 1.3k
0
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1
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1.0k
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Comment: C: mirna / rna-seq integration
4.7 years ago by shawn.w.foley ★ 1.3k
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1
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1.6k
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Comment: C: How to compare two files and grep one smaller and greater numbers
4.7 years ago by shawn.w.foley ★ 1.3k
0
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1
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1.6k
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Comment: C: How to compare two files and grep one smaller and greater numbers
4.7 years ago by shawn.w.foley ★ 1.3k
1
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1
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2.1k
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Comment: C: Error with HTseq RNAseq read count
4.7 years ago by shawn.w.foley ★ 1.3k
0
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1
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1.6k
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Comment: C: How to compare two files and grep smaller and greater numbers
4.7 years ago by shawn.w.foley ★ 1.3k
0
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1
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1.9k
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Comment: C: Chip-seq H3k27 Bowtie2 Alignement
4.7 years ago by shawn.w.foley ★ 1.3k
0
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1
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1.9k
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Comment: C: Chip-seq H3k27 Bowtie2 Alignement
4.7 years ago by shawn.w.foley ★ 1.3k
3
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0
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1.6k
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Comment: C: Number of Comparisons in Bonferroni Correction
4.7 years ago by shawn.w.foley ★ 1.3k
0
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0
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982
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Comment: C: How to find out read counts from bedtools coverage?
4.8 years ago by shawn.w.foley ★ 1.3k
0
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1
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982
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Comment: C: How to find out read counts from bedtools coverage?
4.8 years ago by shawn.w.foley ★ 1.3k
1
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1
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1.4k
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Comment: C: Somatic mutations per gene
4.9 years ago by shawn.w.foley ★ 1.3k
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0
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1.2k
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Comment: C: Wrong results in differential gene expression analysis
4.9 years ago by shawn.w.foley ★ 1.3k
1
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1
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3.0k
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Comment: C: Converting FPKM values to raw read counts
4.9 years ago by shawn.w.foley ★ 1.3k
1
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0
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979
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Comment: C: How can I solve this error when I analysis the micro-array data?
4.9 years ago by shawn.w.foley ★ 1.3k
0
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1
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3.0k
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Comment: C: Converting FPKM values to raw read counts
4.9 years ago by shawn.w.foley ★ 1.3k
0
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0
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853
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Comment: C: issue with ifelse statement
4.9 years ago by shawn.w.foley ★ 1.3k
0
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1
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3.0k
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Comment: C: Removing adaptors from smallRNA seq data
4.9 years ago by shawn.w.foley ★ 1.3k
0
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1
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6.8k
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Comment: C: Label gene name using EnhancedVolcano
4.9 years ago by shawn.w.foley ★ 1.3k
0
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0
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2.4k
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Comment: C: RNA seq data shows no gene expression but qPCR shows the same gene is upregulate
4.9 years ago by shawn.w.foley ★ 1.3k
3
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1
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2.4k
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Comment: C: RNA seq data shows no gene expression but qPCR shows the same gene is upregulate
4.9 years ago by shawn.w.foley ★ 1.3k
0
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1
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1.4k
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Comment: C: any idea about histogram(graphic) clustering?
4.9 years ago by shawn.w.foley ★ 1.3k
0
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1
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1.6k
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Comment: C: Can I convert from PSI to RPKM?
4.9 years ago by shawn.w.foley ★ 1.3k
0
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0
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1.9k
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Comment: C: gcRMA normalize and run differential expression for signal intensity data withou
4.9 years ago by shawn.w.foley ★ 1.3k
0
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0
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1.0k
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Comment: C: bioinformatics tools to connect modifications on RNA to its structure
4.9 years ago by shawn.w.foley ★ 1.3k
0
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0
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1.0k
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Comment: C: bioinformatics tools to connect modifications on RNA to its structure
5.0 years ago by shawn.w.foley ★ 1.3k
1
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1
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3.6k
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Comment: C: CCLE miRNA expression data
5.0 years ago by shawn.w.foley ★ 1.3k
0
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0
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2.9k
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Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
5.0 years ago by shawn.w.foley ★ 1.3k
0
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1
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2.8k
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Comment: C: upSet R plot for variant calling
5.0 years ago by shawn.w.foley ★ 1.3k
0
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0
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1.5k
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Comment: C: Tool to perform GSEA on mapped genes
5.0 years ago by shawn.w.foley ★ 1.3k
1
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0
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822
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Comment: C: Including bioinformatics into an agriculture/horticulture dissertation project
5.0 years ago by shawn.w.foley ★ 1.3k
1
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1
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822
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Comment: C: Including bioinformatics into an agriculture/horticulture dissertation project
5.0 years ago by shawn.w.foley ★ 1.3k
0
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1
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2.1k
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Comment: C: Question about differentially expressed genes selection for low sample size data
5.0 years ago by shawn.w.foley ★ 1.3k
2
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1
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2.1k
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Comment: C: Question about differentially expressed genes selection for low sample size data
5.0 years ago by shawn.w.foley ★ 1.3k
0
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0
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1.1k
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Comment: C: Something strange in RNA-seq raw reads, It is contamination or not?
5.0 years ago by shawn.w.foley ★ 1.3k
0
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0
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2.4k
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Comment: C: Is it possible to convert .CHP files to .CEL?
5.0 years ago by shawn.w.foley ★ 1.3k
0
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1
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4.5k
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Comment: C: Fold change cut off enrichment analysis
5.0 years ago by shawn.w.foley ★ 1.3k
1
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0
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2.1k
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Comment: C: Multiple testing correction issue
5.1 years ago by shawn.w.foley ★ 1.3k
1
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1
reply
1.4k
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Comment: C: RNA Seq analysis of rice samples
5.1 years ago by shawn.w.foley ★ 1.3k
1
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0
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3.2k
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Comment: C: which statistical test use for differential expression with qPCR
5.1 years ago by shawn.w.foley ★ 1.3k
1
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1
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1.1k
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Comment: C: RIP-seq identifing reverse complement reads between smallRNA and targeted mRNA
5.1 years ago by shawn.w.foley ★ 1.3k
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